Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ube3aO08759 BC037039-201ENSMUST00000192003 2205 ntBASIC17.03■□□□□ 0.32
Ube3aO08759 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.03■□□□□ 0.32
Ube3aO08759 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.03■□□□□ 0.32
Ube3aO08759 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.03■□□□□ 0.32
Ube3aO08759 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ube3aO08759 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.03■□□□□ 0.32
Ube3aO08759 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.03■□□□□ 0.32
Ube3aO08759 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3aO08759 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Ube3aO08759 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube3aO08759 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3aO08759 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube3aO08759 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3aO08759 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3aO08759 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3aO08759 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ube3aO08759 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3aO08759 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3aO08759 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.02■□□□□ 0.31
Ube3aO08759 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.01■□□□□ 0.31
Ube3aO08759 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.01■□□□□ 0.31
Ube3aO08759 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.01■□□□□ 0.31
Ube3aO08759 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3aO08759 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ube3aO08759 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ube3aO08759 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ube3aO08759 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ube3aO08759 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3aO08759 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ube3aO08759 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17■□□□□ 0.31
Ube3aO08759 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Ube3aO08759 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Gm7889-201ENSMUST00000185591 958 ntBASIC16.99■□□□□ 0.31
Ube3aO08759 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ube3aO08759 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms