Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mir5122-201ENSMUST00000175004 89 ntBASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Gm7213-201ENSMUST00000215977 950 ntBASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shisa8J3QNX5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shisa8J3QNX5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shisa8J3QNX5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shisa8J3QNX5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.33□□□□□ -0.11
Shisa8J3QNX5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shisa8J3QNX5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa8J3QNX5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms