Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Gm12957-201ENSMUST00000117835 377 ntBASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Gm18049-201ENSMUST00000208909 581 ntBASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc188F6WEU2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Mir1247-201ENSMUST00000116706 82 ntBASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Gm9257-201ENSMUST00000221254 232 ntBASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc188F6WEU2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Gm11918-201ENSMUST00000121660 179 ntBASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc188F6WEU2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc188F6WEU2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc188F6WEU2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc188F6WEU2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc188F6WEU2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc188F6WEU2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc188F6WEU2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc188F6WEU2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Asic1-205ENSMUST00000228185 1818 ntBASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Gm18737-201ENSMUST00000173594 937 ntBASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Gm15823-201ENSMUST00000064305 670 ntBASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc188F6WEU2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc188F6WEU2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc188F6WEU2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc188F6WEU2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms