Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Atf6F6VAN0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.14■□□□□ 0.17
Atf6F6VAN0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atf6F6VAN0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.13■□□□□ 0.17
Atf6F6VAN0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Atf6F6VAN0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.12■□□□□ 0.17
Atf6F6VAN0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.12■□□□□ 0.17
Atf6F6VAN0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Gm15165-201ENSMUST00000118140 502 ntBASIC16.12■□□□□ 0.17
Atf6F6VAN0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Gm27357-201ENSMUST00000183754 135 ntBASIC16.12■□□□□ 0.17
Atf6F6VAN0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.12■□□□□ 0.17
Atf6F6VAN0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atf6F6VAN0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Gm27867-201ENSMUST00000184778 125 ntBASIC16.11■□□□□ 0.17
Atf6F6VAN0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.11■□□□□ 0.17
Atf6F6VAN0 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.11■□□□□ 0.17
Atf6F6VAN0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf6F6VAN0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms