Protein–RNA interactions for Protein: F2Z461

Herc6, E3 ISG15--protein ligase Herc6, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6F2Z461 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Herc6F2Z461 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.24■□□□□ 0.03
Herc6F2Z461 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.24■□□□□ 0.03
Herc6F2Z461 Gm9987-201ENSMUST00000069768 567 ntBASIC15.24■□□□□ 0.03
Herc6F2Z461 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Herc6F2Z461 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Herc6F2Z461 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.23■□□□□ 0.03
Herc6F2Z461 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Gm10052-201ENSMUST00000168019 960 ntBASIC15.23■□□□□ 0.03
Herc6F2Z461 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.23■□□□□ 0.03
Herc6F2Z461 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Gm7729-201ENSMUST00000050143 801 ntBASIC15.23■□□□□ 0.03
Herc6F2Z461 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Herc6F2Z461 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Herc6F2Z461 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Herc6F2Z461 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
Herc6F2Z461 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.23■□□□□ 0.03
Herc6F2Z461 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.23■□□□□ 0.03
Herc6F2Z461 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Herc6F2Z461 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.22■□□□□ 0.03
Herc6F2Z461 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.22■□□□□ 0.03
Herc6F2Z461 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.22■□□□□ 0.03
Herc6F2Z461 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.22■□□□□ 0.03
Herc6F2Z461 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.22■□□□□ 0.03
Herc6F2Z461 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Herc6F2Z461 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Herc6F2Z461 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Herc6F2Z461 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Asic1-205ENSMUST00000228185 1818 ntBASIC15.22■□□□□ 0.03
Herc6F2Z461 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Herc6F2Z461 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.21■□□□□ 0.03
Herc6F2Z461 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Herc6F2Z461 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Herc6F2Z461 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Herc6F2Z461 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Herc6F2Z461 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Herc6F2Z461 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.21■□□□□ 0.03
Herc6F2Z461 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Herc6F2Z461 Gm44430-201ENSMUST00000203376 995 ntBASIC15.21■□□□□ 0.03
Herc6F2Z461 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Herc6F2Z461 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Herc6F2Z461 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Herc6F2Z461 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms