Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.67□□□□□ -0.38
Chd6A3KFM7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.67□□□□□ -0.38
Chd6A3KFM7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.67□□□□□ -0.38
Chd6A3KFM7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.67□□□□□ -0.38
Chd6A3KFM7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chd6A3KFM7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm6973-201ENSMUST00000117080 721 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm12091-201ENSMUST00000146791 830 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Asic1-205ENSMUST00000228185 1818 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm16198-201ENSMUST00000118766 670 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chd6A3KFM7 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.66□□□□□ -0.38
Chd6A3KFM7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Mir5132-201ENSMUST00000175166 71 ntBASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.65□□□□□ -0.38
Chd6A3KFM7 Gm18049-201ENSMUST00000208909 581 ntBASIC12.65□□□□□ -0.38
Chd6A3KFM7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chd6A3KFM7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Chd6A3KFM7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms