Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Gm9987-201ENSMUST00000069768 567 ntBASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-1A0N8R1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-1A0N8R1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Mir770-201ENSMUST00000103252 94 ntBASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Gm6433-201ENSMUST00000118634 875 ntBASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-1A0N8R1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms