Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gm7284-201ENSMUST00000131667 944 ntBASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgb8A0A140LI48 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm10819-201ENSMUST00000099988 561 ntBASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhgb8A0A140LI48 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm45328-201ENSMUST00000210942 917 ntBASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhgb8A0A140LI48 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms