Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm5643-201ENSMUST00000117081 966 ntBASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm27000-201ENSMUST00000182943 842 ntBASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm37856-201ENSMUST00000191634 999 ntBASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms