Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm10052-201ENSMUST00000168019 960 ntBASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm7729-201ENSMUST00000050143 801 ntBASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm34391-201ENSMUST00000203706 907 ntBASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Birc2-201ENSMUST00000054878 378 ntBASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-1A0A0B4J1P8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms