Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm25016-201ENSMUST00000158399 131 ntBASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm45328-201ENSMUST00000210942 917 ntBASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv19A0A0B4J1H4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm29518-201ENSMUST00000190858 372 ntBASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm17808-201ENSMUST00000200859 894 ntBASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv19A0A0B4J1H4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms