Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.17□□□□□ -0.46
Trav16A0A075B653 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16A0A075B653 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav16A0A075B653 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav16A0A075B653 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.16□□□□□ -0.46
Trav16A0A075B653 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16A0A075B653 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.15□□□□□ -0.46
Trav16A0A075B653 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms