Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm26039-201ENSMUST00000158152 144 ntBASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm8520-201ENSMUST00000186517 868 ntBASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm5417-201ENSMUST00000079706 384 ntBASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms