Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Mir1668-201ENSMUST00000184114 107 ntBASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm30025-201ENSMUST00000218555 728 ntBASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15d-1-dv6d-1A0A075B624 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms