Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Gm18195-201ENSMUST00000207604 706 ntBASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Rps4l-201ENSMUST00000071745 943 ntBASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav13d-1A0A075B606 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Gm25745-201ENSMUST00000174945 133 ntBASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Sybu-209ENSMUST00000228639 4113 ntBASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13d-1A0A075B606 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trav13d-1A0A075B606 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.56
Trav13d-1A0A075B606 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13d-1A0A075B606 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms