Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Gm10013-201ENSMUST00000106074 672 ntBASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Gm6623-201ENSMUST00000173570 544 ntBASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-1A0A075B601 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-1A0A075B601 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-1A0A075B601 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms