Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Gm18101-201ENSMUST00000215769 548 ntBASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Gm21559-201ENSMUST00000220638 855 ntBASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Gm8587-201ENSMUST00000076538 843 ntBASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb1S4R1E0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Gm11355-201ENSMUST00000121120 306 ntBASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb1S4R1E0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.28□□□□□ -0.12
H2afb1S4R1E0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Gm37722-201ENSMUST00000193757 208 ntBASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb1S4R1E0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms