Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm7370-201ENSMUST00000219471 767 ntBASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.35□□□□□ -0.27
Cx3cr1Q9Z0D9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm13474-201ENSMUST00000122466 815 ntBASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cx3cr1Q9Z0D9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cx3cr1Q9Z0D9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cx3cr1Q9Z0D9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Cx3cr1Q9Z0D9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cx3cr1Q9Z0D9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cx3cr1Q9Z0D9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cx3cr1Q9Z0D9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms