Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Msh5Q9QUM7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.16■□□□□ 0.18
Msh5Q9QUM7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh5Q9QUM7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Gm45071-201ENSMUST00000205353 571 ntBASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh5Q9QUM7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Msh5Q9QUM7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Gm6623-201ENSMUST00000173570 544 ntBASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Gm6345-202ENSMUST00000180900 204 ntBASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC16.14■□□□□ 0.17
Msh5Q9QUM7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh5Q9QUM7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms