Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.15■□□□□ 0.18
Scn5aQ9JJV9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Gm18889-201ENSMUST00000174284 929 ntBASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scn5aQ9JJV9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scn5aQ9JJV9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Gm7774-201ENSMUST00000200064 533 ntBASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn5aQ9JJV9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn5aQ9JJV9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms