Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Gm2399-201ENSMUST00000104944 225 ntBASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Gm6576-201ENSMUST00000169678 883 ntBASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mbd3l1Q9D9H3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mbd3l1Q9D9H3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms