Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Gm33142-201ENSMUST00000193913 867 ntBASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3c6Q9D8P7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Gtf3c6Q9D8P7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.83■□□□□ 0.29
Gtf3c6Q9D8P7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Gtf3c6Q9D8P7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gtf3c6Q9D8P7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gtf3c6Q9D8P7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3c6Q9D8P7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Gm27357-201ENSMUST00000183754 135 ntBASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Gm9172-201ENSMUST00000212092 954 ntBASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3c6Q9D8P7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Gm43321-201ENSMUST00000198897 2409 ntBASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3c6Q9D8P7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms