Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Dio3-201ENSMUST00000097228 1449 ntBASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps33aQ9D2N9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps33aQ9D2N9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps33aQ9D2N9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.71■□□□□ 0.26
Vps33aQ9D2N9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Vps33aQ9D2N9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vps33aQ9D2N9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Vps33aQ9D2N9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vps33aQ9D2N9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps33aQ9D2N9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms