Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim13Q9CYB0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm27463-201ENSMUST00000183569 57 ntBASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm18421-201ENSMUST00000204122 625 ntBASIC14.58□□□□□ -0.08
Trim13Q9CYB0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim13Q9CYB0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.57□□□□□ -0.08
Trim13Q9CYB0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim13Q9CYB0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Gm10252-201ENSMUST00000209541 832 ntBASIC14.56□□□□□ -0.08
Trim13Q9CYB0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim13Q9CYB0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms