Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Gm6433-201ENSMUST00000118634 875 ntBASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr1Q9CY50 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
Ssr1Q9CY50 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.09■□□□□ 0.33
Ssr1Q9CY50 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr1Q9CY50 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssr1Q9CY50 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssr1Q9CY50 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssr1Q9CY50 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.08■□□□□ 0.33
Ssr1Q9CY50 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Gm11355-201ENSMUST00000121120 306 ntBASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr1Q9CY50 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr1Q9CY50 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms