Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nip7Q9CXK8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Thap2-203ENSMUST00000218989 527 ntBASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nip7Q9CXK8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nip7Q9CXK8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Nip7Q9CXK8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nip7Q9CXK8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.52■□□□□ 0.71
Nip7Q9CXK8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
Nip7Q9CXK8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Gm11745-201ENSMUST00000121669 448 ntBASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Gm5312-201ENSMUST00000203728 547 ntBASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.51■□□□□ 0.71
Nip7Q9CXK8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nip7Q9CXK8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.5■□□□□ 0.71
Nip7Q9CXK8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.49■□□□□ 0.71
Nip7Q9CXK8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms