Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldnd1Q9CQX5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cldnd1Q9CQX5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Gm16198-201ENSMUST00000118766 670 ntBASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Gm5779-201ENSMUST00000218467 910 ntBASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cldnd1Q9CQX5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cldnd1Q9CQX5 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms