Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt88Q9CPR6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt88Q9CPR6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt88Q9CPR6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms