Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Mir6990-201ENSMUST00000183724 91 ntBASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Gm43474-201ENSMUST00000196415 774 ntBASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Gm43438-201ENSMUST00000198133 379 ntBASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx6-1Q99MA9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx6-1Q99MA9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx6-1Q99MA9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx6-1Q99MA9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.71□□□□□ -0.06
Nkx6-1Q99MA9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx6-1Q99MA9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Rprl2-201ENSMUST00000157150 290 ntBASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-1Q99MA9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-1Q99MA9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms