Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm7787-201ENSMUST00000216858 688 ntBASIC15.7■□□□□ 0.1
Cstf1Q99LC2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.7■□□□□ 0.1
Cstf1Q99LC2 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Mir6404-201ENSMUST00000183699 94 ntBASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.69■□□□□ 0.1
Cstf1Q99LC2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Gm17968-201ENSMUST00000194902 784 ntBASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cstf1Q99LC2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Gm44335-201ENSMUST00000196879 141 ntBASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Gm43438-201ENSMUST00000198133 379 ntBASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Gm44297-201ENSMUST00000198304 141 ntBASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Gm44346-201ENSMUST00000198851 141 ntBASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cstf1Q99LC2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Gm5745-201ENSMUST00000183748 313 ntBASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Mir7023-201ENSMUST00000185093 64 ntBASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cstf1Q99LC2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms