Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
TrabdQ99JY4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TrabdQ99JY4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TrabdQ99JY4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TrabdQ99JY4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.32■□□□□ 0.2
TrabdQ99JY4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.32■□□□□ 0.2
TrabdQ99JY4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Gm7787-201ENSMUST00000216858 688 ntBASIC16.32■□□□□ 0.2
TrabdQ99JY4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.32■□□□□ 0.2
TrabdQ99JY4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TrabdQ99JY4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.31■□□□□ 0.2
TrabdQ99JY4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TrabdQ99JY4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.3■□□□□ 0.2
TrabdQ99JY4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.3■□□□□ 0.2
TrabdQ99JY4 Gm15467-201ENSMUST00000120582 445 ntBASIC16.3■□□□□ 0.2
TrabdQ99JY4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Gm5682-201ENSMUST00000173402 505 ntBASIC16.3■□□□□ 0.2
TrabdQ99JY4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.3■□□□□ 0.2
TrabdQ99JY4 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.3■□□□□ 0.2
TrabdQ99JY4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TrabdQ99JY4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms