Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.35□□□□□ -0.11
Lims1Q99JW4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.35□□□□□ -0.11
Lims1Q99JW4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.35□□□□□ -0.11
Lims1Q99JW4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lims1Q99JW4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.34□□□□□ -0.11
Lims1Q99JW4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lims1Q99JW4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.34□□□□□ -0.11
Lims1Q99JW4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lims1Q99JW4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lims1Q99JW4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lims1Q99JW4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Lims1Q99JW4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lims1Q99JW4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.33□□□□□ -0.12
Lims1Q99JW4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Gm21362-201ENSMUST00000194272 928 ntBASIC14.33□□□□□ -0.12
Lims1Q99JW4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.33□□□□□ -0.12
Lims1Q99JW4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lims1Q99JW4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms