Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.15■□□□□ 0.5
Smc1bQ920F6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc1bQ920F6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc1bQ920F6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Smc1bQ920F6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Smc1bQ920F6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Smc1bQ920F6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc1bQ920F6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Gm15920-201ENSMUST00000118998 402 ntBASIC18.13■□□□□ 0.49
Smc1bQ920F6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc1bQ920F6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.12■□□□□ 0.49
Smc1bQ920F6 Gm25911-201ENSMUST00000157621 56 ntBASIC18.12■□□□□ 0.49
Smc1bQ920F6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.12■□□□□ 0.49
Smc1bQ920F6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smc1bQ920F6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc1bQ920F6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms