Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Gm11950-201ENSMUST00000121615 838 ntBASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm1Q8VC85 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 BC037039-201ENSMUST00000192003 2205 ntBASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm1Q8VC85 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm1Q8VC85 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm1Q8VC85 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm1Q8VC85 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm1Q8VC85 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm1Q8VC85 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm1Q8VC85 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Lsm1Q8VC85 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms