Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.22■□□□□ 0.03
Rnf8Q8VC56 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Gm45328-201ENSMUST00000210942 917 ntBASIC15.22■□□□□ 0.03
Rnf8Q8VC56 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf8Q8VC56 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Gm11950-201ENSMUST00000121615 838 ntBASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Gm29518-201ENSMUST00000190858 372 ntBASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf8Q8VC56 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.21■□□□□ 0.02
Rnf8Q8VC56 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Gm6623-201ENSMUST00000173570 544 ntBASIC15.2■□□□□ 0.02
Rnf8Q8VC56 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf8Q8VC56 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Gm14859-201ENSMUST00000117752 357 ntBASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Gm17808-201ENSMUST00000200859 894 ntBASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.19■□□□□ 0.02
Rnf8Q8VC56 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf8Q8VC56 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms