Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm26524-201ENSMUST00000192339 390 ntBASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc9Q8VC31 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19■□□□□ 0.63
Ccdc9Q8VC31 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc9Q8VC31 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Gm10602-201ENSMUST00000098239 609 ntBASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc9Q8VC31 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Rab3c-203ENSMUST00000224180 967 ntBASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc9Q8VC31 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc9Q8VC31 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.96■□□□□ 0.63
Ccdc9Q8VC31 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms