Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap2Q8K389 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap2Q8K389 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Cdk5rap2Q8K389 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cdk5rap2Q8K389 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cdk5rap2Q8K389 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cdk5rap2Q8K389 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Gm2272-201ENSMUST00000194903 582 ntBASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap2Q8K389 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Gm13410-201ENSMUST00000117058 1415 ntBASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Gm44872-201ENSMUST00000207864 420 ntBASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap2Q8K389 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Gm25287-201ENSMUST00000103846 110 ntBASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Gm22918-201ENSMUST00000103855 110 ntBASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Gm6973-201ENSMUST00000117080 721 ntBASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 AC131710.1-201ENSMUST00000228336 990 ntBASIC21.18■□□□□ 0.98
Cdk5rap2Q8K389 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Gm27622-201ENSMUST00000183779 60 ntBASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Rbfox2-208ENSMUST00000227930 1218 ntBASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap2Q8K389 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk5rap2Q8K389 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cdk5rap2Q8K389 Mir449b-201ENSMUST00000104833 80 ntBASIC21.16■□□□□ 0.98
Cdk5rap2Q8K389 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk5rap2Q8K389 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk5rap2Q8K389 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC21.16■□□□□ 0.98
Cdk5rap2Q8K389 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms