Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rdh1Q8CGV4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Gm45167-201ENSMUST00000208007 322 ntBASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rdh1Q8CGV4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Gm15467-201ENSMUST00000120582 445 ntBASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Grk6-207ENSMUST00000225925 2769 ntBASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rdh1Q8CGV4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Gm5264-201ENSMUST00000190584 848 ntBASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rdh1Q8CGV4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rdh1Q8CGV4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms