Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc38Q8CDN8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc38Q8CDN8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Gm13836-201ENSMUST00000121159 501 ntBASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Gm25406-201ENSMUST00000157599 105 ntBASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc38Q8CDN8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms