Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a6Q8C6K9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Gm11424-201ENSMUST00000121929 829 ntBASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Thap2-203ENSMUST00000218989 527 ntBASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a6Q8C6K9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Col6a6Q8C6K9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Col6a6Q8C6K9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Col6a6Q8C6K9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a6Q8C6K9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Gm12428-201ENSMUST00000119844 727 ntBASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Gm27306-201ENSMUST00000183970 107 ntBASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.13□□□□□ -0.15
Col6a6Q8C6K9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms