Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc60Q8C4J0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc60Q8C4J0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc60Q8C4J0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Grk6-207ENSMUST00000225925 2769 ntBASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Gm6296-201ENSMUST00000222599 943 ntBASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc60Q8C4J0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc60Q8C4J0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Gm27741-201ENSMUST00000185060 237 ntBASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc60Q8C4J0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Gm11452-201ENSMUST00000122376 690 ntBASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Gm4535-201ENSMUST00000182274 558 ntBASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Gm5864-201ENSMUST00000202263 970 ntBASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Gm10355-201ENSMUST00000097146 517 ntBASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc60Q8C4J0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Gm13418-201ENSMUST00000119097 944 ntBASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms