Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Gm27463-201ENSMUST00000183569 57 ntBASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Gm37025-201ENSMUST00000195159 829 ntBASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tsen54Q8C2A2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tsen54Q8C2A2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tsen54Q8C2A2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Gm15565-201ENSMUST00000118890 427 ntBASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tsen54Q8C2A2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms