Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3dQ8BX13 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3dQ8BX13 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Birc2-201ENSMUST00000054878 378 ntBASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3dQ8BX13 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.97□□□□□ -0.17
Ube3dQ8BX13 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3dQ8BX13 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Gm13312-201ENSMUST00000119631 718 ntBASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Rprl3-201ENSMUST00000157400 290 ntBASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube3dQ8BX13 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube3dQ8BX13 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube3dQ8BX13 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube3dQ8BX13 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube3dQ8BX13 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ube3dQ8BX13 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ube3dQ8BX13 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms