Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm27742-201ENSMUST00000184667 60 ntBASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Asic1-205ENSMUST00000228185 1818 ntBASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh20Q8BIZ0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Gm9103-201ENSMUST00000119371 405 ntBASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Gm17807-201ENSMUST00000186869 298 ntBASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh20Q8BIZ0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Gm27357-201ENSMUST00000183754 135 ntBASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh20Q8BIZ0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms