Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rbfox3Q8BIF2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Rbfox3Q8BIF2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rbfox3Q8BIF2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Sybu-209ENSMUST00000228639 4113 ntBASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Prob1-201ENSMUST00000097619 3021 ntBASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Gm33142-201ENSMUST00000193913 867 ntBASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rbfox3Q8BIF2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rbfox3Q8BIF2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms