Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Gm15372-201ENSMUST00000120729 834 ntBASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Mzt1-203ENSMUST00000227948 952 ntBASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Gm43347-201ENSMUST00000200226 580 ntBASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Depdc1bQ8BH88 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Gm44771-201ENSMUST00000206975 626 ntBASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Depdc1bQ8BH88 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Mir8098-201ENSMUST00000184011 137 ntBASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Depdc1bQ8BH88 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Depdc1bQ8BH88 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Depdc1bQ8BH88 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Depdc1bQ8BH88 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Depdc1bQ8BH88 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Depdc1bQ8BH88 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Depdc1bQ8BH88 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Gm13312-201ENSMUST00000119631 718 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms