Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrsam1Q80ZI6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Gm16061-201ENSMUST00000122167 857 ntBASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Gm28659-201ENSMUST00000188013 759 ntBASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrsam1Q80ZI6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrsam1Q80ZI6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 App-207ENSMUST00000227737 2827 ntBASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Phf7-203ENSMUST00000226565 1971 ntBASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lrsam1Q80ZI6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Gm9013-201ENSMUST00000132939 882 ntBASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lrsam1Q80ZI6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms