Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp6nlQ80XC3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Mir1895-201ENSMUST00000122615 79 ntBASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp6nlQ80XC3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Gm5177-201ENSMUST00000183092 997 ntBASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp6nlQ80XC3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Gm44872-201ENSMUST00000207864 420 ntBASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Gm45612-201ENSMUST00000211320 160 ntBASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp6nlQ80XC3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Gm15427-201ENSMUST00000117288 531 ntBASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms