Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Gm9987-201ENSMUST00000069768 567 ntBASIC16.43■□□□□ 0.22
Prdm4Q80V63 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prdm4Q80V63 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Prdm4Q80V63 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.41■□□□□ 0.22
Prdm4Q80V63 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prdm4Q80V63 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.4■□□□□ 0.22
Prdm4Q80V63 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prdm4Q80V63 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.4■□□□□ 0.22
Prdm4Q80V63 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Prdm4Q80V63 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prdm4Q80V63 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.4■□□□□ 0.22
Prdm4Q80V63 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Prdm4Q80V63 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prdm4Q80V63 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms