Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.34■□□□□ 0.05
Scn4bQ7M729 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.34■□□□□ 0.05
Scn4bQ7M729 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn4bQ7M729 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn4bQ7M729 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn4bQ7M729 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn4bQ7M729 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn4bQ7M729 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn4bQ7M729 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.33■□□□□ 0.04
Scn4bQ7M729 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Gm25406-201ENSMUST00000157599 105 ntBASIC15.33■□□□□ 0.04
Scn4bQ7M729 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Gm44454-201ENSMUST00000198541 138 ntBASIC15.33■□□□□ 0.04
Scn4bQ7M729 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn4bQ7M729 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Gm27357-201ENSMUST00000183754 135 ntBASIC15.32■□□□□ 0.04
Scn4bQ7M729 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.32■□□□□ 0.04
Scn4bQ7M729 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn4bQ7M729 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Scn4bQ7M729 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.31■□□□□ 0.04
Scn4bQ7M729 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn4bQ7M729 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Scn4bQ7M729 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms